diff --git a/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/NetplaySession.kt b/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/NetplaySession.kt
index 56676c4d3f..d44e70ba09 100644
--- a/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/NetplaySession.kt
+++ b/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/NetplaySession.kt
@@ -23,6 +23,7 @@ import kotlinx.coroutines.flow.receiveAsFlow
 import kotlinx.coroutines.flow.runningFold
 import kotlinx.coroutines.isActive
 import kotlinx.coroutines.withContext
+import org.dolphinemu.dolphinemu.features.netplay.model.ControllerMapping
 import org.dolphinemu.dolphinemu.features.netplay.model.GameDigestProgress
 import org.dolphinemu.dolphinemu.features.netplay.model.NetplayMessage
 import org.dolphinemu.dolphinemu.features.netplay.model.Player
@@ -87,6 +88,12 @@ class NetplaySession(
     )
     val players = _players.asSharedFlow().distinctUntilChanged()
 
+    private val _controllerMapping = MutableSharedFlow<ControllerMapping>(
+        replay = 1,
+        onBufferOverflow = BufferOverflow.DROP_OLDEST
+    )
+    val controllerMapping = _controllerMapping.asSharedFlow().distinctUntilChanged()
+
     private val _chatMessages = MutableSharedFlow<String>(
         extraBufferCapacity = 32,
         onBufferOverflow = BufferOverflow.DROP_OLDEST
@@ -185,6 +192,11 @@ class NetplaySession(
 
     fun reconnectTraversal() = nativeReconnectTraversal()
 
+    fun setControllerMapping(mapping: ControllerMapping) {
+        nativeSetPadMapping(mapping.gamecubePorts.map { it?.pid ?: 0 }.toIntArray())
+        nativeSetWiimoteMapping(mapping.wiiRemotes.map { it?.pid ?: 0 }.toIntArray())
+    }
+
     fun consumeBootSessionData(): Long {
         return bootSessionDataPointer.also {
             bootSessionDataPointer = 0
@@ -278,6 +290,14 @@ class NetplaySession(
 
     private external fun nativeReconnectTraversal()
 
+    private external fun nativeGetPadMapping(): IntArray
+
+    private external fun nativeGetWiimoteMapping(): IntArray
+
+    private external fun nativeSetPadMapping(mapping: IntArray)
+
+    private external fun nativeSetWiimoteMapping(mapping: IntArray)
+
     // NetPlayUI callbacks
 
     @Keep
@@ -304,7 +324,16 @@ class NetplaySession(
 
     @Keep
     fun onUpdate(players: Array<Player>) {
-        _players.tryEmit(players.toList())
+        val playersList = players.toList()
+        _players.tryEmit(playersList)
+
+        fun findPlayer(playerId: Int) = playersList.find { it.pid == playerId }
+        _controllerMapping.tryEmit(
+            ControllerMapping(
+                gamecubePorts = nativeGetPadMapping().map(::findPlayer).toList(),
+                wiiRemotes = nativeGetWiimoteMapping().map(::findPlayer).toList(),
+            )
+        )
     }
 
     @Keep
diff --git a/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/ControllerMapping.kt b/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/ControllerMapping.kt
new file mode 100644
index 0000000000..d7cfae0ab3
--- /dev/null
+++ b/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/ControllerMapping.kt
@@ -0,0 +1,24 @@
+// SPDX-License-Identifier: GPL-2.0-or-later
+
+package org.dolphinemu.dolphinemu.features.netplay.model
+
+data class ControllerMapping(
+    val gamecubePorts: List<Player?>,
+    val wiiRemotes: List<Player?>,
+) {
+    fun withGamecubePort(port: Int, player: Player?) =
+        copy(gamecubePorts = gamecubePorts.replace(port, player))
+
+    fun withWiiRemote(port: Int, player: Player?) =
+        copy(wiiRemotes = wiiRemotes.replace(port, player))
+
+    companion object {
+        fun emptyControllerMapping(): ControllerMapping = ControllerMapping(
+            gamecubePorts = emptyList(),
+            wiiRemotes = emptyList(),
+        )
+    }
+}
+
+private fun <T> List<T>.replace(index: Int, value: T) =
+    toMutableList().also { it[index] = value }
diff --git a/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/NetplayViewModel.kt b/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/NetplayViewModel.kt
index 0764448824..1e3aea26a2 100644
--- a/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/NetplayViewModel.kt
+++ b/Source/Android/app/src/main/java/org/dolphinemu/dolphinemu/features/netplay/model/NetplayViewModel.kt
@@ -20,6 +20,7 @@ import kotlinx.coroutines.flow.receiveAsFlow
 import kotlinx.coroutines.flow.stateIn
 import kotlinx.coroutines.launch
 import org.dolphinemu.dolphinemu.features.netplay.NetplaySession
+import org.dolphinemu.dolphinemu.features.netplay.model.ControllerMapping.Companion.emptyControllerMapping
 import org.dolphinemu.dolphinemu.features.settings.model.BooleanSetting
 import org.dolphinemu.dolphinemu.features.settings.model.IntSetting
 import org.dolphinemu.dolphinemu.features.settings.model.NativeConfig
@@ -59,6 +60,9 @@ class NetplayViewModel(
     val players = netplaySession.players
         .stateIn(viewModelScope, SharingStarted.WhileSubscribed(), emptyList())
 
+    val controllerMapping = netplaySession.controllerMapping
+        .stateIn(viewModelScope, SharingStarted.WhileSubscribed(), emptyControllerMapping())
+
     val messages = netplaySession.messages
         .stateIn(viewModelScope, SharingStarted.WhileSubscribed(), emptyList())
 
@@ -168,6 +172,18 @@ class NetplayViewModel(
         netplaySession.changeGame(gameFile)
     }
 
+    fun setGamecubePort(portNumber: Int, player: Player?) {
+        netplaySession.setControllerMapping(
+            controllerMapping.value.withGamecubePort(portNumber, player)
+        )
+    }
+
+    fun setWiiRemote(remoteNumber: Int, player: Player?) {
+        netplaySession.setControllerMapping(
+            controllerMapping.value.withWiiRemote(remoteNumber, player)
+        )
+    }
+
     private fun getLocalIp(): JoinAddress {
         val localIp = networkHelper.getLocalIpString()
             ?: return JoinAddress.Unknown { _joinAddresses.value += JoinInfoType.LOCAL to getLocalIp() }
diff --git a/Source/Android/jni/NetPlay/Netplay.cpp b/Source/Android/jni/NetPlay/Netplay.cpp
index d6e24d250b..287f2cdd27 100644
--- a/Source/Android/jni/NetPlay/Netplay.cpp
+++ b/Source/Android/jni/NetPlay/Netplay.cpp
@@ -1,6 +1,7 @@
 // Copyright 2026 Dolphin Emulator Project
 // SPDX-License-Identifier: GPL-2.0-or-later
 
+#include <array>
 #include <memory>
 #include <string>
 #include <vector>
@@ -38,6 +39,30 @@ static NetPlay::NetPlayServer* GetServerPointer(JNIEnv* env, jobject obj)
       env->GetLongField(obj, IDCache::GetNetPlayServerPointer()));
 }
 
+static jintArray PadMappingArrayToJIntArray(JNIEnv* env, const NetPlay::PadMappingArray& mapping)
+{
+  const jsize size = static_cast<jsize>(mapping.size());
+  jintArray jmapping = env->NewIntArray(size);
+  std::array<jint, 4> values;
+  for (size_t i = 0; i < mapping.size(); i++)
+    values[i] = static_cast<jint>(mapping[i]);
+  env->SetIntArrayRegion(jmapping, 0, size, values.data());
+  return jmapping;
+}
+
+static bool JIntArrayToPadMappingArray(JNIEnv* env, jintArray jmapping,
+                                       NetPlay::PadMappingArray* mapping)
+{
+  if (env->GetArrayLength(jmapping) != static_cast<jsize>(mapping->size()))
+    return false;
+
+  std::array<jint, 4> values;
+  env->GetIntArrayRegion(jmapping, 0, static_cast<jsize>(values.size()), values.data());
+  for (size_t i = 0; i < mapping->size(); i++)
+    (*mapping)[i] = static_cast<NetPlay::PlayerId>(values[i]);
+  return true;
+}
+
 extern "C" {
 
 JNIEXPORT void JNICALL
@@ -224,6 +249,54 @@ Java_org_dolphinemu_dolphinemu_features_netplay_NetplaySession_nativeReconnectTr
     Common::g_TraversalClient->ReconnectToServer();
 }
 
+JNIEXPORT jintArray JNICALL
+Java_org_dolphinemu_dolphinemu_features_netplay_NetplaySession_nativeGetPadMapping(JNIEnv* env,
+                                                                                   jobject obj)
+{
+  auto* server = GetServerPointer(env, obj);
+  if (!server)
+    return env->NewIntArray(0);
+
+  return PadMappingArrayToJIntArray(env, server->GetPadMapping());
+}
+
+JNIEXPORT jintArray JNICALL
+Java_org_dolphinemu_dolphinemu_features_netplay_NetplaySession_nativeGetWiimoteMapping(JNIEnv* env,
+                                                                                       jobject obj)
+{
+  auto* server = GetServerPointer(env, obj);
+  if (!server)
+    return env->NewIntArray(0);
+
+  return PadMappingArrayToJIntArray(env, server->GetWiimoteMapping());
+}
+
+JNIEXPORT void JNICALL
+Java_org_dolphinemu_dolphinemu_features_netplay_NetplaySession_nativeSetPadMapping(
+    JNIEnv* env, jobject obj, jintArray jmapping)
+{
+  auto* server = GetServerPointer(env, obj);
+  if (!server)
+    return;
+
+  NetPlay::PadMappingArray mapping = server->GetPadMapping();
+  if (JIntArrayToPadMappingArray(env, jmapping, &mapping))
+    server->SetPadMapping(mapping);
+}
+
+JNIEXPORT void JNICALL
+Java_org_dolphinemu_dolphinemu_features_netplay_NetplaySession_nativeSetWiimoteMapping(
+    JNIEnv* env, jobject obj, jintArray jmapping)
+{
+  auto* server = GetServerPointer(env, obj);
+  if (!server)
+    return;
+
+  NetPlay::PadMappingArray mapping = server->GetWiimoteMapping();
+  if (JIntArrayToPadMappingArray(env, jmapping, &mapping))
+    server->SetWiimoteMapping(mapping);
+}
+
 JNIEXPORT void JNICALL
 Java_org_dolphinemu_dolphinemu_features_netplay_NetplaySession_nativeReleaseUICallbacks(
     JNIEnv*, jobject, jlong pointer)