diff --git a/src/citra_qt/configuration/config.cpp b/src/citra_qt/configuration/config.cpp
index d611d33063..818680f5dd 100644
--- a/src/citra_qt/configuration/config.cpp
+++ b/src/citra_qt/configuration/config.cpp
@@ -821,6 +821,7 @@ void Config::SaveValues() {
     SaveLayoutValues();
     SaveAudioValues();
     SaveSystemValues();
+    qt_config->sync();
 }
 
 void Config::SaveAudioValues() {